rhendrix,
I'm no pro trainer at running but have a few trainers who work for who are. We are learning (actually finally believing) that pain is not to be ignored and often signals "too much, too fast".
We get runners all the time complaining about injuries and when we quiz them, we usually find they have increased volume recently but didn't realize the increase was way too much.
Example, someone running 3 miles, 3x per week, steps up the volume to 4 miles, 4x per week. "Just a few miles" they think. They run that a few weeks and suddenly injuries appear and they are perplexed.
Yet the math shows that is a 33% increase in volume which is a lot.
In weight training, we typically apply 5% increases to avoid injury. My point is that if you have stepped up the volume (common when someone gets new shoes), that may be the pain source, not the shoes. Just a guess. Best of luck!